Preheat the oven to 450° F. In a baking dish, combine the tomatoes, olive oil, vinegar, honey, garlic, shallots, lemon, oregano, thyme, and a big pinch of chili flakes. Bake for 15-20 minutes, or until the tomatoes begin to burst and the oil is sizzling.Meanwhile, cube the feta cheese and arrange it in a shallow serving bowl. Lightly crumble half of the feta cubes. Spoon the warm tomatoes and oil over the feta. Season with additional sea salt and black pepper. Top with basil.